Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atf7Q8R0S1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Gm23935-201ENSMUST00000102303 57 ntBASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Gm24270-201ENSMUST00000102326 57 ntBASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Gm24245-201ENSMUST00000157318 57 ntBASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Gm43575-201ENSMUST00000196420 516 ntBASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Mir125a-201ENSMUST00000083545 68 ntBASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf7Q8R0S1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Gm5779-201ENSMUST00000218467 910 ntBASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Gm8396-201ENSMUST00000057361 823 ntBASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf7Q8R0S1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Mir449b-201ENSMUST00000104833 80 ntBASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Gm7774-201ENSMUST00000200064 533 ntBASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atf7Q8R0S1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms