Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Gm17837-201ENSMUST00000186435 985 ntBASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3a1Q8K4Z5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3a1Q8K4Z5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Gm13453-201ENSMUST00000118708 357 ntBASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3a1Q8K4Z5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Gm15653-201ENSMUST00000119247 907 ntBASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms