Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Gm43289-201ENSMUST00000200537 1475 ntBASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Gm6082-201ENSMUST00000215204 454 ntBASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Ddx54Q8K4L0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Gm5637-201ENSMUST00000153890 1119 ntBASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Gm22902-201ENSMUST00000158488 302 ntBASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Gm2991-201ENSMUST00000173338 480 ntBASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Nsd1-205ENSMUST00000224693 852 ntBASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx54Q8K4L0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC18.39■□□□□ 0.54
Ddx54Q8K4L0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx54Q8K4L0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx54Q8K4L0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx54Q8K4L0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx54Q8K4L0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx54Q8K4L0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx54Q8K4L0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx54Q8K4L0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Mir686-201ENSMUST00000102174 109 ntBASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Gm24255-201ENSMUST00000104481 128 ntBASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Gm14381-201ENSMUST00000122105 414 ntBASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Gm5620-201ENSMUST00000077991 1348 ntBASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx54Q8K4L0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx54Q8K4L0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms