Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Gm6222-201ENSMUST00000120787 396 ntBASIC13.42□□□□□ -0.26
Clrn1Q8K445 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.42□□□□□ -0.26
Clrn1Q8K445 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Gm5779-201ENSMUST00000218467 910 ntBASIC13.41□□□□□ -0.26
Clrn1Q8K445 Gm8396-201ENSMUST00000057361 823 ntBASIC13.41□□□□□ -0.26
Clrn1Q8K445 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn1Q8K445 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.4□□□□□ -0.26
Clrn1Q8K445 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Mir449b-201ENSMUST00000104833 80 ntBASIC13.4□□□□□ -0.26
Clrn1Q8K445 Gm13823-201ENSMUST00000119930 345 ntBASIC13.4□□□□□ -0.26
Clrn1Q8K445 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.4□□□□□ -0.26
Clrn1Q8K445 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clrn1Q8K445 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Clrn1Q8K445 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Clrn1Q8K445 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn1Q8K445 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms