Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Crlf2Q8CII9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Crlf2Q8CII9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Crlf2Q8CII9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Crlf2Q8CII9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Crlf2Q8CII9 Gm13786-201ENSMUST00000122371 333 ntBASIC15.08■□□□□ 0
Crlf2Q8CII9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.08■□□□□ 0
Crlf2Q8CII9 Gm6152-201ENSMUST00000151704 340 ntBASIC15.08■□□□□ 0
Crlf2Q8CII9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.08■□□□□ 0
Crlf2Q8CII9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf2Q8CII9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.08■□□□□ 0
Crlf2Q8CII9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Crlf2Q8CII9 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.08■□□□□ 0
Crlf2Q8CII9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf2Q8CII9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.08■□□□□ 0
Crlf2Q8CII9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf2Q8CII9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf2Q8CII9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.08■□□□□ 0
Crlf2Q8CII9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Crlf2Q8CII9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf2Q8CII9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.08■□□□□ 0
Crlf2Q8CII9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.08■□□□□ 0
Crlf2Q8CII9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.07■□□□□ 0
Crlf2Q8CII9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Crlf2Q8CII9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.07■□□□□ 0
Crlf2Q8CII9 Mir5120-201ENSMUST00000175020 78 ntBASIC15.07■□□□□ 0
Crlf2Q8CII9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.07■□□□□ 0
Crlf2Q8CII9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.07■□□□□ 0
Crlf2Q8CII9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Crlf2Q8CII9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf2Q8CII9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Gm15957-201ENSMUST00000118893 974 ntBASIC15.06■□□□□ 0
Crlf2Q8CII9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
Crlf2Q8CII9 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.06■□□□□ 0
Crlf2Q8CII9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.06■□□□□ 0
Crlf2Q8CII9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Crlf2Q8CII9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf2Q8CII9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms