Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.97■□□□□ 0.15
Syne4Q8CII8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.97■□□□□ 0.15
Syne4Q8CII8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.97■□□□□ 0.15
Syne4Q8CII8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Syne4Q8CII8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Gm22331-201ENSMUST00000158066 136 ntBASIC15.96■□□□□ 0.15
Syne4Q8CII8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.96■□□□□ 0.15
Syne4Q8CII8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Gm44397-201ENSMUST00000195950 113 ntBASIC15.96■□□□□ 0.15
Syne4Q8CII8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Syne4Q8CII8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Syne4Q8CII8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Syne4Q8CII8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.95■□□□□ 0.14
Syne4Q8CII8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.95■□□□□ 0.14
Syne4Q8CII8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.95■□□□□ 0.14
Syne4Q8CII8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gm38223-201ENSMUST00000194484 695 ntBASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.95■□□□□ 0.14
Syne4Q8CII8 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.95■□□□□ 0.14
Syne4Q8CII8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.95■□□□□ 0.14
Syne4Q8CII8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Syne4Q8CII8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.94■□□□□ 0.14
Syne4Q8CII8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.94■□□□□ 0.14
Syne4Q8CII8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syne4Q8CII8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms