Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.52□□□□□ -0.08
CopaQ8CIE6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.52□□□□□ -0.09
CopaQ8CIE6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.52□□□□□ -0.09
CopaQ8CIE6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.52□□□□□ -0.09
CopaQ8CIE6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CopaQ8CIE6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CopaQ8CIE6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.51□□□□□ -0.09
CopaQ8CIE6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Gm38294-201ENSMUST00000192831 381 ntBASIC14.51□□□□□ -0.09
CopaQ8CIE6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CopaQ8CIE6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.5□□□□□ -0.09
CopaQ8CIE6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Gm18049-201ENSMUST00000208909 581 ntBASIC14.5□□□□□ -0.09
CopaQ8CIE6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.5□□□□□ -0.09
CopaQ8CIE6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.5□□□□□ -0.09
CopaQ8CIE6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CopaQ8CIE6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.5□□□□□ -0.09
CopaQ8CIE6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CopaQ8CIE6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms