Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.32□□□□□ -0.12
Clip4Q8CI96 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.32□□□□□ -0.12
Clip4Q8CI96 Gm15483-201ENSMUST00000120338 456 ntBASIC14.32□□□□□ -0.12
Clip4Q8CI96 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.32□□□□□ -0.12
Clip4Q8CI96 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.32□□□□□ -0.12
Clip4Q8CI96 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clip4Q8CI96 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.31□□□□□ -0.12
Clip4Q8CI96 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Gm18737-201ENSMUST00000173594 937 ntBASIC14.31□□□□□ -0.12
Clip4Q8CI96 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clip4Q8CI96 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.3□□□□□ -0.12
Clip4Q8CI96 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms