Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rftn2Q8CHX7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rftn2Q8CHX7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.04■□□□□ -0
Rftn2Q8CHX7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rftn2Q8CHX7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.03■□□□□ -0
Rftn2Q8CHX7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.03■□□□□ -0
Rftn2Q8CHX7 Gm5279-201ENSMUST00000199575 745 ntBASIC15.03■□□□□ -0
Rftn2Q8CHX7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rftn2Q8CHX7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.02■□□□□ -0
Rftn2Q8CHX7 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.02■□□□□ -0
Rftn2Q8CHX7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.02■□□□□ -0
Rftn2Q8CHX7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Gm9794-201ENSMUST00000202370 423 ntBASIC15.02■□□□□ -0
Rftn2Q8CHX7 Gm18624-201ENSMUST00000220966 658 ntBASIC15.02■□□□□ -0
Rftn2Q8CHX7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rftn2Q8CHX7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rftn2Q8CHX7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Gm13385-201ENSMUST00000121089 220 ntBASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Gm11424-201ENSMUST00000121929 829 ntBASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Gm24420-201ENSMUST00000176676 59 ntBASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Rftn2Q8CHX7 Gm45605-201ENSMUST00000210265 4269 ntBASIC15□□□□□ -0.01
Rftn2Q8CHX7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rftn2Q8CHX7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms