Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zc3h3Q8CHP0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zc3h3Q8CHP0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zc3h3Q8CHP0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zc3h3Q8CHP0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Zc3h3Q8CHP0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Zc3h3Q8CHP0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Gm15370-201ENSMUST00000117158 253 ntBASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.75□□□□□ -0.21
Zc3h3Q8CHP0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Mir686-201ENSMUST00000102174 109 ntBASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Gm25261-201ENSMUST00000157416 134 ntBASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Gm25927-201ENSMUST00000175058 117 ntBASIC13.74□□□□□ -0.21
Zc3h3Q8CHP0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms