Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hist3h2bbQ8CGP0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms