Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gm45167-201ENSMUST00000208007 322 ntBASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gm18669-201ENSMUST00000216049 778 ntBASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc28bQ8CEG5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc28bQ8CEG5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc28bQ8CEG5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms