Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Gm18905-201ENSMUST00000205454 928 ntBASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 AC125117.2-201ENSMUST00000228344 1140 ntBASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph6aQ8CDR2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Gm11918-201ENSMUST00000121660 179 ntBASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Gm8927-201ENSMUST00000181978 981 ntBASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Gm3222-201ENSMUST00000071282 990 ntBASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph6aQ8CDR2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph6aQ8CDR2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Gm27701-201ENSMUST00000184498 110 ntBASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.41■□□□□ 0.54
Rsph6aQ8CDR2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms