Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Gm6916-202ENSMUST00000205523 195 ntBASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ccdc60Q8C4J0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc60Q8C4J0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Gm14767-201ENSMUST00000121559 586 ntBASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Gm27680-201ENSMUST00000184192 160 ntBASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc60Q8C4J0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc60Q8C4J0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Gm15653-201ENSMUST00000119247 907 ntBASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Gm44608-201ENSMUST00000206827 855 ntBASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms