Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp44Q8C2S0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp44Q8C2S0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp44Q8C2S0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp44Q8C2S0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Usp44Q8C2S0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Usp44Q8C2S0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.58■□□□□ 0.25
Usp44Q8C2S0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Usp44Q8C2S0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.58■□□□□ 0.24
Usp44Q8C2S0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.57■□□□□ 0.24
Usp44Q8C2S0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Gm3436-201ENSMUST00000179930 840 ntBASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp44Q8C2S0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms