Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Gm37714-201ENSMUST00000194742 342 ntBASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh3rf2Q8BZT2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh3rf2Q8BZT2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Gm5354-201ENSMUST00000182417 973 ntBASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Gm5425-201ENSMUST00000214125 459 ntBASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Gm17795-201ENSMUST00000214505 757 ntBASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Gm18027-201ENSMUST00000218947 619 ntBASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf2Q8BZT2 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms