Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.64□□□□□ -0.39
Ube3dQ8BX13 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube3dQ8BX13 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gm27920-201ENSMUST00000183953 96 ntBASIC12.62□□□□□ -0.39
Ube3dQ8BX13 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gm5779-201ENSMUST00000218467 910 ntBASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.62□□□□□ -0.39
Ube3dQ8BX13 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube3dQ8BX13 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.61□□□□□ -0.39
Ube3dQ8BX13 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms