Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Usp54Q8BL06 Gm6203-201ENSMUST00000209575 1342 ntBASIC19.83■□□□□ 0.77
Usp54Q8BL06 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp54Q8BL06 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp54Q8BL06 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp54Q8BL06 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp54Q8BL06 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp54Q8BL06 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Gm43822-201ENSMUST00000200285 476 ntBASIC19.83■□□□□ 0.76
Usp54Q8BL06 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Olfr284-202ENSMUST00000206647 966 ntBASIC19.83■□□□□ 0.76
Usp54Q8BL06 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp54Q8BL06 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Gm13369-201ENSMUST00000119442 987 ntBASIC19.82■□□□□ 0.76
Usp54Q8BL06 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp54Q8BL06 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Gm37259-201ENSMUST00000193903 849 ntBASIC19.82■□□□□ 0.76
Usp54Q8BL06 Gm18630-201ENSMUST00000222109 1397 ntBASIC19.82■□□□□ 0.76
Usp54Q8BL06 Cts7-204ENSMUST00000225321 1257 ntBASIC19.82■□□□□ 0.76
Usp54Q8BL06 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp54Q8BL06 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Gm4935-201ENSMUST00000221316 1198 ntBASIC19.81■□□□□ 0.76
Usp54Q8BL06 Gm10146-201ENSMUST00000072739 309 ntBASIC19.81■□□□□ 0.76
Usp54Q8BL06 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp54Q8BL06 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Gm37008-201ENSMUST00000195712 319 ntBASIC19.8■□□□□ 0.76
Usp54Q8BL06 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.8■□□□□ 0.76
Usp54Q8BL06 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp54Q8BL06 Gm8337-201ENSMUST00000187358 1938 ntBASIC19.8■□□□□ 0.76
Usp54Q8BL06 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC19.79■□□□□ 0.76
Usp54Q8BL06 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC19.79■□□□□ 0.76
Usp54Q8BL06 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Gm7783-201ENSMUST00000204795 781 ntBASIC19.79■□□□□ 0.76
Usp54Q8BL06 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms