Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Gm12260-201ENSMUST00000122447 411 ntBASIC13.71□□□□□ -0.21
Rnf38Q8BI21 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Gm27525-201ENSMUST00000184465 107 ntBASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf38Q8BI21 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.71□□□□□ -0.22
Rnf38Q8BI21 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Gm10275-202ENSMUST00000168697 495 ntBASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Gm8584-201ENSMUST00000171982 758 ntBASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Gm10275-201ENSMUST00000092620 635 ntBASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.7□□□□□ -0.22
Rnf38Q8BI21 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rnf38Q8BI21 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms