Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Gm23547-201ENSMUST00000158210 271 ntBASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Gm37230-201ENSMUST00000194491 818 ntBASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm25287-201ENSMUST00000103846 110 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm22918-201ENSMUST00000103855 110 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm4995-201ENSMUST00000117247 432 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm6736-201ENSMUST00000166583 948 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm18889-201ENSMUST00000174284 929 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn3Q8BHH8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Carlr-201ENSMUST00000181515 2574 ntBASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms