Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Dupd1-202ENSMUST00000224735 548 ntBASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.37■□□□□ 0.21
Prpf40bQ80W14 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Mir1982-201ENSMUST00000157368 74 ntBASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf40bQ80W14 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Gm21854-201ENSMUST00000179901 471 ntBASIC16.35■□□□□ 0.21
Prpf40bQ80W14 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Prpf40bQ80W14 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Gm12957-201ENSMUST00000117835 377 ntBASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf40bQ80W14 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms