Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ubfd1Q78JW9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.81□□□□□ -0.2
Ubfd1Q78JW9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gm37714-201ENSMUST00000194742 342 ntBASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gm18027-201ENSMUST00000218947 619 ntBASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ubfd1Q78JW9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms