Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Gm5763-201ENSMUST00000155951 1530 ntBASIC14□□□□□ -0.17
Scaf4Q6PFF0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Gm43364-201ENSMUST00000196046 3274 ntBASIC14□□□□□ -0.17
Scaf4Q6PFF0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Gm24589-201ENSMUST00000116692 94 ntBASIC14□□□□□ -0.17
Scaf4Q6PFF0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14□□□□□ -0.17
Scaf4Q6PFF0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Gm43570-201ENSMUST00000199951 3688 ntBASIC14□□□□□ -0.17
Scaf4Q6PFF0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scaf4Q6PFF0 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Gm27628-201ENSMUST00000184911 107 ntBASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scaf4Q6PFF0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scaf4Q6PFF0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms