Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nup98Q6PFD9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Nup98Q6PFD9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Nup98Q6PFD9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Nup98Q6PFD9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.46■□□□□ 0.22
Nup98Q6PFD9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nup98Q6PFD9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Nup98Q6PFD9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Gm7561-201ENSMUST00000211203 886 ntBASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Gm45784-201ENSMUST00000188360 142 ntBASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Gm17330-201ENSMUST00000221047 165 ntBASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Gm24447-201ENSMUST00000083977 338 ntBASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nup98Q6PFD9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup98Q6PFD9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Gm15371-201ENSMUST00000117057 784 ntBASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Mir1938-201ENSMUST00000158746 100 ntBASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup98Q6PFD9 Gm22018-201ENSMUST00000104357 131 ntBASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms