Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm11591-201ENSMUST00000120063 702 ntBASIC15.12■□□□□ 0.01
ShbQ6PD21 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ShbQ6PD21 Gm37986-201ENSMUST00000193285 383 ntBASIC15.12■□□□□ 0.01
ShbQ6PD21 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.12■□□□□ 0.01
ShbQ6PD21 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
ShbQ6PD21 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.12■□□□□ 0.01
ShbQ6PD21 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
ShbQ6PD21 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShbQ6PD21 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.12■□□□□ 0.01
ShbQ6PD21 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ShbQ6PD21 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ShbQ6PD21 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.11■□□□□ 0.01
ShbQ6PD21 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.11■□□□□ 0.01
ShbQ6PD21 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.11■□□□□ 0.01
ShbQ6PD21 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.11■□□□□ 0.01
ShbQ6PD21 Gm37489-201ENSMUST00000191883 159 ntBASIC15.11■□□□□ 0.01
ShbQ6PD21 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.11■□□□□ 0.01
ShbQ6PD21 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.11■□□□□ 0.01
ShbQ6PD21 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ShbQ6PD21 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShbQ6PD21 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ShbQ6PD21 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ShbQ6PD21 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Gm6023-201ENSMUST00000118217 606 ntBASIC15.1■□□□□ 0.01
ShbQ6PD21 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.1■□□□□ 0.01
ShbQ6PD21 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.1■□□□□ 0.01
ShbQ6PD21 Gm29741-201ENSMUST00000192667 421 ntBASIC15.1■□□□□ 0.01
ShbQ6PD21 Gm44487-201ENSMUST00000205145 325 ntBASIC15.1■□□□□ 0.01
ShbQ6PD21 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ShbQ6PD21 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
ShbQ6PD21 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ShbQ6PD21 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ShbQ6PD21 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShbQ6PD21 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ShbQ6PD21 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.09■□□□□ 0.01
ShbQ6PD21 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ShbQ6PD21 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ShbQ6PD21 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm11618-201ENSMUST00000117946 267 ntBASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.09■□□□□ 0.01
ShbQ6PD21 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.09■□□□□ 0.01
ShbQ6PD21 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms