Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Gm27301-201ENSMUST00000184012 127 ntBASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcd3Q6P9Z1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Gm37230-201ENSMUST00000194491 818 ntBASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Gm2651-201ENSMUST00000203560 838 ntBASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Gm44771-201ENSMUST00000206975 626 ntBASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd3Q6P9Z1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Smarcd3Q6P9Z1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd3Q6P9Z1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd3Q6P9Z1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms