Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb4Q6P8W9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Dupd1-202ENSMUST00000224735 548 ntBASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb4Q6P8W9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Gm27631-201ENSMUST00000184163 466 ntBASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.88□□□□□ -0.03
Hmgb4Q6P8W9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Gm4875-201ENSMUST00000118257 786 ntBASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Gm15321-201ENSMUST00000121290 288 ntBASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Gm9726-201ENSMUST00000180321 678 ntBASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Gm29667-201ENSMUST00000190817 490 ntBASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb4Q6P8W9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms