Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sp140Q6NSQ5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Gm12882-201ENSMUST00000121696 517 ntBASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sp140Q6NSQ5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Gm14822-201ENSMUST00000122247 291 ntBASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sp140Q6NSQ5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms