Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt39Q6IFX4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Krt39Q6IFX4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt39Q6IFX4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Krt39Q6IFX4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt39Q6IFX4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt39Q6IFX4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Gm27920-201ENSMUST00000183953 96 ntBASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.69■□□□□ 0.1
Krt39Q6IFX4 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.69■□□□□ 0.1
Krt39Q6IFX4 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Krt39Q6IFX4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Gm14494-201ENSMUST00000118786 435 ntBASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Krt39Q6IFX4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Mir8117-201ENSMUST00000184773 107 ntBASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.67■□□□□ 0.1
Krt39Q6IFX4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Rpph1-201ENSMUST00000175096 319 ntBASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Mir3113-201ENSMUST00000175478 76 ntBASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Krt39Q6IFX4 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms