Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Gm6916-202ENSMUST00000205523 195 ntBASIC14.94□□□□□ -0.02
Scube3Q66PY1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.94□□□□□ -0.02
Scube3Q66PY1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scube3Q66PY1 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.94□□□□□ -0.02
Scube3Q66PY1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Scube3Q66PY1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.93□□□□□ -0.02
Scube3Q66PY1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Gm45696-201ENSMUST00000212088 985 ntBASIC14.93□□□□□ -0.02
Scube3Q66PY1 Gm7775-201ENSMUST00000218871 853 ntBASIC14.93□□□□□ -0.02
Scube3Q66PY1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scube3Q66PY1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.92□□□□□ -0.02
Scube3Q66PY1 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC14.92□□□□□ -0.02
Scube3Q66PY1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scube3Q66PY1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scube3Q66PY1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms