Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC18.71■□□□□ 0.59
Gli3Q61602 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Abhd6-203ENSMUST00000225234 1958 ntBASIC18.71■□□□□ 0.59
Gli3Q61602 Gm10434-201ENSMUST00000101158 471 ntBASIC18.71■□□□□ 0.59
Gli3Q61602 Gm15770-201ENSMUST00000117498 584 ntBASIC18.71■□□□□ 0.59
Gli3Q61602 Gm8885-201ENSMUST00000189382 598 ntBASIC18.71■□□□□ 0.59
Gli3Q61602 Gm5896-201ENSMUST00000189662 1024 ntBASIC18.71■□□□□ 0.59
Gli3Q61602 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gli3Q61602 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gli3Q61602 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gli3Q61602 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Gli3Q61602 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC18.7■□□□□ 0.58
Gli3Q61602 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.7■□□□□ 0.58
Gli3Q61602 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gli3Q61602 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gli3Q61602 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC18.7■□□□□ 0.58
Gli3Q61602 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gli3Q61602 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Gli3Q61602 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Gm11637-201ENSMUST00000120601 592 ntBASIC18.69■□□□□ 0.58
Gli3Q61602 Gm9555-201ENSMUST00000200908 583 ntBASIC18.69■□□□□ 0.58
Gli3Q61602 Gm17330-201ENSMUST00000221047 165 ntBASIC18.69■□□□□ 0.58
Gli3Q61602 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gli3Q61602 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC18.69■□□□□ 0.58
Gli3Q61602 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gli3Q61602 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Gli3Q61602 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Gli3Q61602 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gli3Q61602 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gli3Q61602 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli3Q61602 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli3Q61602 Gm37042-201ENSMUST00000193816 581 ntBASIC18.68■□□□□ 0.58
Gli3Q61602 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC18.68■□□□□ 0.58
Gli3Q61602 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli3Q61602 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.68■□□□□ 0.58
Gli3Q61602 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli3Q61602 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli3Q61602 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC18.68■□□□□ 0.58
Gli3Q61602 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.68■□□□□ 0.58
Gli3Q61602 Gm2231-201ENSMUST00000125661 612 ntBASIC18.68■□□□□ 0.58
Gli3Q61602 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Gli3Q61602 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gli3Q61602 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli3Q61602 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gli3Q61602 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.67■□□□□ 0.58
Gli3Q61602 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.67■□□□□ 0.58
Gli3Q61602 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC18.67■□□□□ 0.58
Gli3Q61602 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 Gm8908-201ENSMUST00000121633 1024 ntBASIC18.67■□□□□ 0.58
Gli3Q61602 Gm14665-201ENSMUST00000122294 557 ntBASIC18.67■□□□□ 0.58
Gli3Q61602 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gli3Q61602 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gli3Q61602 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gli3Q61602 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Gli3Q61602 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms