Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ift88Q61371 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.71■□□□□ 0.1
Ift88Q61371 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.7■□□□□ 0.1
Ift88Q61371 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.7■□□□□ 0.1
Ift88Q61371 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.7■□□□□ 0.1
Ift88Q61371 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.7■□□□□ 0.1
Ift88Q61371 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.7■□□□□ 0.1
Ift88Q61371 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Ift88Q61371 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.7■□□□□ 0.1
Ift88Q61371 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Ift88Q61371 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ift88Q61371 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ift88Q61371 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ift88Q61371 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.7■□□□□ 0.1
Ift88Q61371 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ift88Q61371 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.69■□□□□ 0.1
Ift88Q61371 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ift88Q61371 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.69■□□□□ 0.1
Ift88Q61371 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ift88Q61371 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.69■□□□□ 0.1
Ift88Q61371 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ift88Q61371 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ift88Q61371 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.69■□□□□ 0.1
Ift88Q61371 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ift88Q61371 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ift88Q61371 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ift88Q61371 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ift88Q61371 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ift88Q61371 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ift88Q61371 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.68■□□□□ 0.1
Ift88Q61371 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.68■□□□□ 0.1
Ift88Q61371 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ift88Q61371 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ift88Q61371 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.68■□□□□ 0.1
Ift88Q61371 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.68■□□□□ 0.1
Ift88Q61371 Rpph1-201ENSMUST00000175096 319 ntBASIC15.68■□□□□ 0.1
Ift88Q61371 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ift88Q61371 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.68■□□□□ 0.1
Ift88Q61371 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.68■□□□□ 0.1
Ift88Q61371 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ift88Q61371 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ift88Q61371 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ift88Q61371 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.67■□□□□ 0.1
Ift88Q61371 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.67■□□□□ 0.1
Ift88Q61371 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.67■□□□□ 0.1
Ift88Q61371 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ift88Q61371 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.67■□□□□ 0.1
Ift88Q61371 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms