Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.54□□□□□ -0.24
Nr1h4Q60641 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.53□□□□□ -0.24
Nr1h4Q60641 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.53□□□□□ -0.24
Nr1h4Q60641 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Gm21362-201ENSMUST00000194272 928 ntBASIC13.53□□□□□ -0.24
Nr1h4Q60641 Gm37230-201ENSMUST00000194491 818 ntBASIC13.53□□□□□ -0.24
Nr1h4Q60641 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.53□□□□□ -0.24
Nr1h4Q60641 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.53□□□□□ -0.24
Nr1h4Q60641 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nr1h4Q60641 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nr1h4Q60641 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.52□□□□□ -0.24
Nr1h4Q60641 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nr1h4Q60641 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.52□□□□□ -0.24
Nr1h4Q60641 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.52□□□□□ -0.25
Nr1h4Q60641 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nr1h4Q60641 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Gm7977-201ENSMUST00000193787 748 ntBASIC13.51□□□□□ -0.25
Nr1h4Q60641 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms