Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Gm16215-201ENSMUST00000161990 637 ntBASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Gm27437-201ENSMUST00000183429 107 ntBASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Mir6977-201ENSMUST00000184960 64 ntBASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps54Q5SPW0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps54Q5SPW0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps54Q5SPW0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps54Q5SPW0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Vps54Q5SPW0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps54Q5SPW0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Gm9522-201ENSMUST00000182394 926 ntBASIC17.01■□□□□ 0.31
Vps54Q5SPW0 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.01■□□□□ 0.31
Vps54Q5SPW0 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Vps54Q5SPW0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vps54Q5SPW0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Vps54Q5SPW0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17■□□□□ 0.31
Vps54Q5SPW0 Gm37714-201ENSMUST00000194742 342 ntBASIC17■□□□□ 0.31
Vps54Q5SPW0 AC153872.1-201ENSMUST00000199539 128 ntBASIC17■□□□□ 0.31
Vps54Q5SPW0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17■□□□□ 0.31
Vps54Q5SPW0 AC124732.1-201ENSMUST00000221551 910 ntBASIC17■□□□□ 0.31
Vps54Q5SPW0 AC154846.1-201ENSMUST00000226278 862 ntBASIC17■□□□□ 0.31
Vps54Q5SPW0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17■□□□□ 0.31
Vps54Q5SPW0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Vps54Q5SPW0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps54Q5SPW0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Gm15393-201ENSMUST00000120499 219 ntBASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Gm24694-201ENSMUST00000180054 110 ntBASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Gm27663-201ENSMUST00000184839 110 ntBASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.99■□□□□ 0.31
Vps54Q5SPW0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Gm44855-201ENSMUST00000205725 362 ntBASIC16.99■□□□□ 0.31
Vps54Q5SPW0 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps54Q5SPW0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps54Q5SPW0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms