Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Gm17330-201ENSMUST00000221047 165 ntBASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shank3Q4ACU6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Gm16479-201ENSMUST00000121706 932 ntBASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Gm2383-201ENSMUST00000181461 807 ntBASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Gm9368-201ENSMUST00000219348 831 ntBASIC17.28■□□□□ 0.36
Shank3Q4ACU6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shank3Q4ACU6 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Gm3890-201ENSMUST00000182416 207 ntBASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Gm42627-201ENSMUST00000197347 224 ntBASIC17.27■□□□□ 0.36
Shank3Q4ACU6 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Gm7046-201ENSMUST00000221351 977 ntBASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Shank3Q4ACU6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank3Q4ACU6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank3Q4ACU6 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank3Q4ACU6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms