Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Limch1Q3UH68 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Limch1Q3UH68 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.71■□□□□ 0.27
Limch1Q3UH68 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Gm17837-201ENSMUST00000186435 985 ntBASIC16.71■□□□□ 0.27
Limch1Q3UH68 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.71■□□□□ 0.27
Limch1Q3UH68 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Limch1Q3UH68 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Limch1Q3UH68 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.26
Limch1Q3UH68 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.7■□□□□ 0.26
Limch1Q3UH68 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.7■□□□□ 0.26
Limch1Q3UH68 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Gm5745-201ENSMUST00000183748 313 ntBASIC16.7■□□□□ 0.26
Limch1Q3UH68 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.7■□□□□ 0.26
Limch1Q3UH68 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.7■□□□□ 0.26
Limch1Q3UH68 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Limch1Q3UH68 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Gm5866-201ENSMUST00000177881 973 ntBASIC16.69■□□□□ 0.26
Limch1Q3UH68 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Gm27989-201ENSMUST00000184721 107 ntBASIC16.69■□□□□ 0.26
Limch1Q3UH68 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Gm38294-201ENSMUST00000192831 381 ntBASIC16.69■□□□□ 0.26
Limch1Q3UH68 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.69■□□□□ 0.26
Limch1Q3UH68 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.69■□□□□ 0.26
Limch1Q3UH68 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limch1Q3UH68 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limch1Q3UH68 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limch1Q3UH68 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Limch1Q3UH68 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limch1Q3UH68 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Limch1Q3UH68 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Limch1Q3UH68 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms