Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.35□□□□□ -0.27
Mmp25Q3U435 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gm14057-201ENSMUST00000120631 482 ntBASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gm12151-201ENSMUST00000121374 290 ntBASIC13.35□□□□□ -0.27
Mmp25Q3U435 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gm43703-201ENSMUST00000200523 763 ntBASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.35□□□□□ -0.27
Mmp25Q3U435 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp25Q3U435 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Gm15460-201ENSMUST00000118147 391 ntBASIC13.34□□□□□ -0.27
Mmp25Q3U435 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.34□□□□□ -0.27
Mmp25Q3U435 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp25Q3U435 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp25Q3U435 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.33□□□□□ -0.27
Mmp25Q3U435 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp25Q3U435 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Mmp25Q3U435 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp25Q3U435 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp25Q3U435 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.33□□□□□ -0.28
Mmp25Q3U435 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.33□□□□□ -0.28
Mmp25Q3U435 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.33□□□□□ -0.28
Mmp25Q3U435 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms