Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm42612-201ENSMUST00000197986 623 ntBASIC12.32□□□□□ -0.44
Q3U1D9 Gm43170-201ENSMUST00000199827 612 ntBASIC12.32□□□□□ -0.44
Q3U1D9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.32□□□□□ -0.44
Q3U1D9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.32□□□□□ -0.44
Q3U1D9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Q3U1D9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Q3U1D9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Q3U1D9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Q3U1D9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Q3U1D9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3U1D9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Q3U1D9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Q3U1D9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.31□□□□□ -0.44
Q3U1D9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.31□□□□□ -0.44
Q3U1D9 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.31□□□□□ -0.44
Q3U1D9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Gm8515-201ENSMUST00000194852 576 ntBASIC12.31□□□□□ -0.44
Q3U1D9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Q3U1D9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.31□□□□□ -0.44
Q3U1D9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.3□□□□□ -0.44
Q3U1D9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Q3U1D9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Q3U1D9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Q3U1D9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.3□□□□□ -0.44
Q3U1D9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Q3U1D9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.3□□□□□ -0.44
Q3U1D9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.3□□□□□ -0.44
Q3U1D9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.3□□□□□ -0.44
Q3U1D9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.3□□□□□ -0.44
Q3U1D9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Q3U1D9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Q3U1D9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.3□□□□□ -0.44
Q3U1D9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.3□□□□□ -0.44
Q3U1D9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Q3U1D9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms