Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Khdc4Q3TCX3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Khdc4Q3TCX3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Gm15487-201ENSMUST00000122373 465 ntBASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Gm44855-201ENSMUST00000205725 362 ntBASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Syt7-205ENSMUST00000224135 1557 ntBASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Khdc4Q3TCX3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Khdc4Q3TCX3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Gm24543-201ENSMUST00000103867 82 ntBASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Gm9719-201ENSMUST00000162765 543 ntBASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Gm7775-201ENSMUST00000218871 853 ntBASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Khdc4Q3TCX3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms