Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Gm14140-201ENSMUST00000119999 995 ntBASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nhej1Q3KNJ2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhej1Q3KNJ2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhej1Q3KNJ2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nhej1Q3KNJ2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nhej1Q3KNJ2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nhej1Q3KNJ2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nhej1Q3KNJ2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nhej1Q3KNJ2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.1■□□□□ 0.01
Nhej1Q3KNJ2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms