Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Prob1-201ENSMUST00000097619 3021 ntBASIC7.34□□□□□ -1.23
Ush2AQ2QI47 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Ush2AQ2QI47 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Ush2AQ2QI47 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Ush2AQ2QI47 Gm11450-201ENSMUST00000121144 333 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm8913-201ENSMUST00000209491 641 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm7904-201ENSMUST00000217049 465 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 AC129219.2-201ENSMUST00000224324 701 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm14109-201ENSMUST00000118814 309 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm8969-201ENSMUST00000199694 526 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm15547-201ENSMUST00000122152 333 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm43692-201ENSMUST00000198236 1062 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm6855-201ENSMUST00000206307 790 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm19963-201ENSMUST00000208413 1255 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 CT485607.1-201ENSMUST00000216100 85 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Gm43294-201ENSMUST00000202850 2490 ntBASIC7.33□□□□□ -1.24
Ush2AQ2QI47 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ush2AQ2QI47 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm7985-201ENSMUST00000183329 981 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm5513-201ENSMUST00000072982 1218 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm14150-201ENSMUST00000122404 1354 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm15515-201ENSMUST00000117827 822 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm5950-201ENSMUST00000213337 772 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm12990-201ENSMUST00000120372 468 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm2231-201ENSMUST00000125661 612 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Gm44651-201ENSMUST00000207343 372 ntBASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC7.32□□□□□ -1.24
Ush2AQ2QI47 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms