Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab42Q0PD08 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.59□□□□□ -0.39
Rab42Q0PD08 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.59□□□□□ -0.39
Rab42Q0PD08 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rab42Q0PD08 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rab42Q0PD08 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rab42Q0PD08 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gm15173-201ENSMUST00000122049 433 ntBASIC12.58□□□□□ -0.4
Rab42Q0PD08 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gm10499-201ENSMUST00000174094 934 ntBASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.58□□□□□ -0.4
Rab42Q0PD08 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.58□□□□□ -0.4
Rab42Q0PD08 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab42Q0PD08 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.57□□□□□ -0.4
Rab42Q0PD08 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Gm25925-201ENSMUST00000158314 306 ntBASIC12.57□□□□□ -0.4
Rab42Q0PD08 Gm10060-201ENSMUST00000212002 111 ntBASIC12.57□□□□□ -0.4
Rab42Q0PD08 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab42Q0PD08 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Gm13884-201ENSMUST00000118103 829 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms