Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.39□□□□□ -0.11
Ebf1Q07802 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Gm9182-201ENSMUST00000217829 639 ntBASIC14.39□□□□□ -0.11
Ebf1Q07802 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.39□□□□□ -0.11
Ebf1Q07802 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ebf1Q07802 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.39□□□□□ -0.11
Ebf1Q07802 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf1Q07802 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ebf1Q07802 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ebf1Q07802 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ebf1Q07802 Gm37230-201ENSMUST00000194491 818 ntBASIC14.38□□□□□ -0.11
Ebf1Q07802 Olfr286-202ENSMUST00000205305 969 ntBASIC14.38□□□□□ -0.11
Ebf1Q07802 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.38□□□□□ -0.11
Ebf1Q07802 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ebf1Q07802 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.38□□□□□ -0.11
Ebf1Q07802 Gm9797-201ENSMUST00000052902 613 ntBASIC14.38□□□□□ -0.11
Ebf1Q07802 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.38□□□□□ -0.11
Ebf1Q07802 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ebf1Q07802 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf1Q07802 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ebf1Q07802 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.37□□□□□ -0.11
Ebf1Q07802 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.37□□□□□ -0.11
Ebf1Q07802 Gm28760-201ENSMUST00000185995 736 ntBASIC14.37□□□□□ -0.11
Ebf1Q07802 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.37□□□□□ -0.11
Ebf1Q07802 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ebf1Q07802 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.37□□□□□ -0.11
Ebf1Q07802 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ebf1Q07802 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.37□□□□□ -0.11
Ebf1Q07802 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ebf1Q07802 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.37□□□□□ -0.11
Ebf1Q07802 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Ebf1Q07802 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ebf1Q07802 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf1Q07802 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.36□□□□□ -0.11
Ebf1Q07802 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.36□□□□□ -0.11
Ebf1Q07802 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf1Q07802 Gm8602-201ENSMUST00000184045 607 ntBASIC14.36□□□□□ -0.11
Ebf1Q07802 Gm10766-202ENSMUST00000194123 606 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms