Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 AA543401-201ENSMUST00000164248 1269 ntBASIC12.48□□□□□ -0.41
Thbs3Q05895 Gm8584-201ENSMUST00000171982 758 ntBASIC12.48□□□□□ -0.41
Thbs3Q05895 Gm25948-201ENSMUST00000175334 112 ntBASIC12.48□□□□□ -0.41
Thbs3Q05895 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.48□□□□□ -0.41
Thbs3Q05895 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.48□□□□□ -0.41
Thbs3Q05895 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.48□□□□□ -0.41
Thbs3Q05895 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Thbs3Q05895 Mir125a-201ENSMUST00000083545 68 ntBASIC12.48□□□□□ -0.41
Thbs3Q05895 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Thbs3Q05895 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Thbs3Q05895 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.48□□□□□ -0.41
Thbs3Q05895 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Thbs3Q05895 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Gm24543-201ENSMUST00000103867 82 ntBASIC12.47□□□□□ -0.41
Thbs3Q05895 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Thbs3Q05895 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thbs3Q05895 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Thbs3Q05895 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Thbs3Q05895 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.46□□□□□ -0.41
Thbs3Q05895 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.46□□□□□ -0.41
Thbs3Q05895 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Thbs3Q05895 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.46□□□□□ -0.41
Thbs3Q05895 Gm25144-201ENSMUST00000179561 110 ntBASIC12.46□□□□□ -0.41
Thbs3Q05895 Gm25352-201ENSMUST00000179815 110 ntBASIC12.46□□□□□ -0.41
Thbs3Q05895 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Gm28630-201ENSMUST00000187806 498 ntBASIC12.46□□□□□ -0.41
Thbs3Q05895 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.46□□□□□ -0.41
Thbs3Q05895 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Dupd1-202ENSMUST00000224735 548 ntBASIC12.46□□□□□ -0.41
Thbs3Q05895 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Gm5867-201ENSMUST00000063197 592 ntBASIC12.46□□□□□ -0.41
Thbs3Q05895 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thbs3Q05895 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.42
Thbs3Q05895 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Thbs3Q05895 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thbs3Q05895 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thbs3Q05895 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms