Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Col9a1Q05722 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm13611-201ENSMUST00000118269 318 ntBASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm11524-201ENSMUST00000119349 807 ntBASIC13.88□□□□□ -0.19
Col9a1Q05722 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm16112-201ENSMUST00000159075 382 ntBASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm25732-201ENSMUST00000175168 60 ntBASIC13.88□□□□□ -0.19
Col9a1Q05722 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm42779-201ENSMUST00000198807 406 ntBASIC13.88□□□□□ -0.19
Col9a1Q05722 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm7600-201ENSMUST00000209657 785 ntBASIC13.88□□□□□ -0.19
Col9a1Q05722 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.88□□□□□ -0.19
Col9a1Q05722 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm10268-201ENSMUST00000085340 555 ntBASIC13.88□□□□□ -0.19
Col9a1Q05722 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col9a1Q05722 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col9a1Q05722 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.88□□□□□ -0.19
Col9a1Q05722 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col9a1Q05722 AC136019.1-201ENSMUST00000226503 1412 ntBASIC13.88□□□□□ -0.19
Col9a1Q05722 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col9a1Q05722 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col9a1Q05722 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.87□□□□□ -0.19
Col9a1Q05722 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col9a1Q05722 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.87□□□□□ -0.19
Col9a1Q05722 Gm4271-201ENSMUST00000174444 973 ntBASIC13.87□□□□□ -0.19
Col9a1Q05722 Gm29155-201ENSMUST00000185910 269 ntBASIC13.87□□□□□ -0.19
Col9a1Q05722 Gm43094-201ENSMUST00000196549 921 ntBASIC13.87□□□□□ -0.19
Col9a1Q05722 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.87□□□□□ -0.19
Col9a1Q05722 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.87□□□□□ -0.19
Col9a1Q05722 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC13.87□□□□□ -0.19
Col9a1Q05722 CT025552.1-201ENSMUST00000224561 521 ntBASIC13.87□□□□□ -0.19
Col9a1Q05722 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col9a1Q05722 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col9a1Q05722 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col9a1Q05722 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a1Q05722 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.86□□□□□ -0.19
Col9a1Q05722 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm15371-201ENSMUST00000117057 784 ntBASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm15131-201ENSMUST00000119124 595 ntBASIC13.86□□□□□ -0.19
Col9a1Q05722 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm25927-201ENSMUST00000175058 117 ntBASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC13.86□□□□□ -0.19
Col9a1Q05722 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.86□□□□□ -0.19
Col9a1Q05722 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col9a1Q05722 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm7046-201ENSMUST00000221351 977 ntBASIC13.86□□□□□ -0.19
Col9a1Q05722 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.86□□□□□ -0.19
Col9a1Q05722 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col9a1Q05722 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Col9a1Q05722 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a1Q05722 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms