Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a2Q02788 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col6a2Q02788 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col6a2Q02788 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col6a2Q02788 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Gm15460-201ENSMUST00000118147 391 ntBASIC14.16□□□□□ -0.14
Col6a2Q02788 Gm15957-201ENSMUST00000118893 974 ntBASIC14.16□□□□□ -0.14
Col6a2Q02788 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Col6a2Q02788 Gm24694-201ENSMUST00000180054 110 ntBASIC14.16□□□□□ -0.14
Col6a2Q02788 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Gm27663-201ENSMUST00000184839 110 ntBASIC14.16□□□□□ -0.14
Col6a2Q02788 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col6a2Q02788 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col6a2Q02788 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col6a2Q02788 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col6a2Q02788 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.16□□□□□ -0.14
Col6a2Q02788 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col6a2Q02788 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a2Q02788 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Gm15393-201ENSMUST00000120499 219 ntBASIC14.15□□□□□ -0.14
Col6a2Q02788 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.15□□□□□ -0.14
Col6a2Q02788 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.15□□□□□ -0.14
Col6a2Q02788 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.15□□□□□ -0.14
Col6a2Q02788 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a2Q02788 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.15□□□□□ -0.14
Col6a2Q02788 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col6a2Q02788 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Col6a2Q02788 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.14□□□□□ -0.15
Col6a2Q02788 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Col6a2Q02788 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col6a2Q02788 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Gm7488-201ENSMUST00000117148 684 ntBASIC14.14□□□□□ -0.15
Col6a2Q02788 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.14□□□□□ -0.15
Col6a2Q02788 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.14□□□□□ -0.15
Col6a2Q02788 Gm23547-201ENSMUST00000158210 271 ntBASIC14.14□□□□□ -0.15
Col6a2Q02788 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.14□□□□□ -0.15
Col6a2Q02788 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.14□□□□□ -0.15
Col6a2Q02788 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.14□□□□□ -0.15
Col6a2Q02788 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.14□□□□□ -0.15
Col6a2Q02788 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.14□□□□□ -0.15
Col6a2Q02788 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col6a2Q02788 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col6a2Q02788 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col6a2Q02788 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a2Q02788 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col6a2Q02788 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col6a2Q02788 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col6a2Q02788 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms