Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.14■□□□□ 0.33
Snai1Q02085 Gm42550-201ENSMUST00000201553 960 ntBASIC17.14■□□□□ 0.33
Snai1Q02085 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.14■□□□□ 0.33
Snai1Q02085 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.14■□□□□ 0.33
Snai1Q02085 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.14■□□□□ 0.33
Snai1Q02085 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snai1Q02085 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snai1Q02085 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snai1Q02085 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snai1Q02085 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Snai1Q02085 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.13■□□□□ 0.33
Snai1Q02085 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.13■□□□□ 0.33
Snai1Q02085 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snai1Q02085 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snai1Q02085 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.13■□□□□ 0.33
Snai1Q02085 Gm10156-201ENSMUST00000122364 462 ntBASIC17.13■□□□□ 0.33
Snai1Q02085 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.13■□□□□ 0.33
Snai1Q02085 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.13■□□□□ 0.33
Snai1Q02085 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.13■□□□□ 0.33
Snai1Q02085 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Gm9257-201ENSMUST00000221254 232 ntBASIC17.13■□□□□ 0.33
Snai1Q02085 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Gm7399-201ENSMUST00000032395 858 ntBASIC17.13■□□□□ 0.33
Snai1Q02085 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.13■□□□□ 0.33
Snai1Q02085 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
Snai1Q02085 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.13■□□□□ 0.33
Snai1Q02085 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snai1Q02085 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snai1Q02085 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Snai1Q02085 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Snai1Q02085 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Snai1Q02085 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Gm5687-201ENSMUST00000118252 640 ntBASIC17.12■□□□□ 0.33
Snai1Q02085 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.12■□□□□ 0.33
Snai1Q02085 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.12■□□□□ 0.33
Snai1Q02085 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.12■□□□□ 0.33
Snai1Q02085 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Snai1Q02085 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Snai1Q02085 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.12■□□□□ 0.33
Snai1Q02085 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.12■□□□□ 0.33
Snai1Q02085 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.12■□□□□ 0.33
Snai1Q02085 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snai1Q02085 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Snai1Q02085 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.11■□□□□ 0.33
Snai1Q02085 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Snai1Q02085 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.11■□□□□ 0.33
Snai1Q02085 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.11■□□□□ 0.33
Snai1Q02085 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Snai1Q02085 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.11■□□□□ 0.33
Snai1Q02085 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.11■□□□□ 0.33
Snai1Q02085 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.11■□□□□ 0.33
Snai1Q02085 Gm19309-201ENSMUST00000218295 205 ntBASIC17.11■□□□□ 0.33
Snai1Q02085 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.11■□□□□ 0.33
Snai1Q02085 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.11■□□□□ 0.33
Snai1Q02085 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snai1Q02085 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms