Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm27357-201ENSMUST00000183754 135 ntBASIC11.93□□□□□ -0.5
Npas1P97459 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.93□□□□□ -0.5
Npas1P97459 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.93□□□□□ -0.5
Npas1P97459 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.93□□□□□ -0.5
Npas1P97459 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Npas1P97459 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.93□□□□□ -0.5
Npas1P97459 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Npas1P97459 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Npas1P97459 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Npas1P97459 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Npas1P97459 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.92□□□□□ -0.5
Npas1P97459 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Npas1P97459 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Npas1P97459 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Npas1P97459 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.92□□□□□ -0.5
Npas1P97459 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.92□□□□□ -0.5
Npas1P97459 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.92□□□□□ -0.5
Npas1P97459 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.92□□□□□ -0.5
Npas1P97459 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.92□□□□□ -0.5
Npas1P97459 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Npas1P97459 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Npas1P97459 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Npas1P97459 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.91□□□□□ -0.5
Npas1P97459 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Npas1P97459 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.91□□□□□ -0.5
Npas1P97459 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.91□□□□□ -0.5
Npas1P97459 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Npas1P97459 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.91□□□□□ -0.5
Npas1P97459 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.91□□□□□ -0.5
Npas1P97459 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Npas1P97459 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.91□□□□□ -0.5
Npas1P97459 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Npas1P97459 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms