Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.72■□□□□ 0.43
Nkx2-3P97334 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx2-3P97334 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Gm24196-201ENSMUST00000179161 110 ntBASIC17.71■□□□□ 0.43
Nkx2-3P97334 Gm27486-201ENSMUST00000184923 80 ntBASIC17.71■□□□□ 0.43
Nkx2-3P97334 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.71■□□□□ 0.43
Nkx2-3P97334 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkx2-3P97334 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.71■□□□□ 0.43
Nkx2-3P97334 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx2-3P97334 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Nkx2-3P97334 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.7■□□□□ 0.42
Nkx2-3P97334 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Gm8062-201ENSMUST00000139696 444 ntBASIC17.7■□□□□ 0.42
Nkx2-3P97334 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Gm45784-201ENSMUST00000188360 142 ntBASIC17.7■□□□□ 0.42
Nkx2-3P97334 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.7■□□□□ 0.42
Nkx2-3P97334 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.7■□□□□ 0.42
Nkx2-3P97334 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.7■□□□□ 0.42
Nkx2-3P97334 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-3P97334 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Gm11803-201ENSMUST00000119966 444 ntBASIC17.69■□□□□ 0.42
Nkx2-3P97334 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Gm27847-201ENSMUST00000183711 107 ntBASIC17.69■□□□□ 0.42
Nkx2-3P97334 Gm27375-201ENSMUST00000183799 107 ntBASIC17.69■□□□□ 0.42
Nkx2-3P97334 Gm27731-201ENSMUST00000185192 107 ntBASIC17.69■□□□□ 0.42
Nkx2-3P97334 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.69■□□□□ 0.42
Nkx2-3P97334 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-3P97334 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.69■□□□□ 0.42
Nkx2-3P97334 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.68■□□□□ 0.42
Nkx2-3P97334 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.68■□□□□ 0.42
Nkx2-3P97334 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nkx2-3P97334 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms