Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.35■□□□□ 0.05
CiitaP79621 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.35■□□□□ 0.05
CiitaP79621 Gm18027-201ENSMUST00000218947 619 ntBASIC15.35■□□□□ 0.05
CiitaP79621 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.35■□□□□ 0.05
CiitaP79621 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CiitaP79621 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CiitaP79621 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CiitaP79621 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.35■□□□□ 0.05
CiitaP79621 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CiitaP79621 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CiitaP79621 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.34■□□□□ 0.05
CiitaP79621 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.34■□□□□ 0.05
CiitaP79621 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CiitaP79621 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.34■□□□□ 0.05
CiitaP79621 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CiitaP79621 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.34■□□□□ 0.05
CiitaP79621 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.34■□□□□ 0.05
CiitaP79621 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.34■□□□□ 0.05
CiitaP79621 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CiitaP79621 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.34■□□□□ 0.05
CiitaP79621 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CiitaP79621 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.34■□□□□ 0.05
CiitaP79621 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.34■□□□□ 0.05
CiitaP79621 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.34■□□□□ 0.05
CiitaP79621 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.34■□□□□ 0.05
CiitaP79621 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CiitaP79621 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CiitaP79621 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CiitaP79621 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
CiitaP79621 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CiitaP79621 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CiitaP79621 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.33■□□□□ 0.04
CiitaP79621 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CiitaP79621 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CiitaP79621 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
CiitaP79621 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CiitaP79621 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.33■□□□□ 0.04
CiitaP79621 Gm15240-201ENSMUST00000118156 720 ntBASIC15.33■□□□□ 0.04
CiitaP79621 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.33■□□□□ 0.04
CiitaP79621 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.33■□□□□ 0.04
CiitaP79621 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.33■□□□□ 0.04
CiitaP79621 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.33■□□□□ 0.04
CiitaP79621 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CiitaP79621 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.33■□□□□ 0.04
CiitaP79621 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CiitaP79621 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CiitaP79621 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.33■□□□□ 0.04
CiitaP79621 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CiitaP79621 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CiitaP79621 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.32■□□□□ 0.04
CiitaP79621 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CiitaP79621 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CiitaP79621 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CiitaP79621 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms